Genome Compare and View
Genomic Cluster Visualizer with ESM-2 Protein Embeddings & a custom linear genome viewer
🧬 DNA Sequences & NCBI Accession Input
🌐 Load NCBI Accessions Demo
PASTE MULTI-FASTA SEQUENCES (Headers = Cluster Names)
NCBI ACCESSIONS (ONE PER LINE)
🚀 Run Alignment
🧬 Annotate
🗺️ Interactive Genome Alignment Map
📊 Pairwise Metric Inspector
💾 Save SVG Figure
💾 Save JSON Data
Link Metric
ESM-2 Cosine Similarity (0 → 1)
Sequence Similarity (0 → 1)
Colour Genes By
Annotation
Best PHROG hit
Link Identity Threshold:
0.986
Fetching functional annotations from Qdrant… gene colours will update automatically.
📊 Pairwise Distance & Identity Inspector
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ESM-2 Cosine Similarity Matrix
Sequence Identity Matrix